Soil biodiversity - DNA Bacteria and Fungi

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Provided by European Commission, Joint Research Centre

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Dataset information

Catalog

European Commission, Joint Research Centre catalog

Country of origin

EU institutions

Updated

2023.04.19 00:00

Created

2023.02.16

Available languages

English

Keywords

Datasource

Official portal for European data link

Quality scoring

Dataset description

The dataset includes 16S and ITS raw DNA sequences for 885 samples collected as part of LUCAS 2018 Soil survey2,3 for the biodiversity module. Raw DNA sequences are deposited on NCBI Sequence Read Archive (SRA) database under BioProject ID PRJNA952168. Samples from four locations were re-sampled, and thus sequenced twice, due to sampling issues (i.e., 885 total samples from 881 sampling sites): samples n° 59, 102, 113, 116 were re-sequenced as samples n° 138, 601, 717, 258 respectively.

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2019

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